Conserved Protein Domain Family
CYP27C1

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cd20647: CYP27C1 
cytochrome P450 family 27, subfamily C, polypeptide 1, also called all-trans retinol 3,4-desaturase
Cytochrome P450 27C1 (CYP27C1) is also called all-trans retinol 3,4-desaturase. It catalyzes the conversion of all-trans retinol (also called vitamin A1, the precursor of 11-cis retinal) to 3,4-didehydroretinol (also called vitamin A2, the precursor of 11-cis 3,4-didehydroretinal). CYP27C1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410740
Aligned: 4 rows
Threshold Bit Score: 918.158
Created: 25-Sep-2017
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
heme bindingputative
Feature 1:heme binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                           #                  ##      #   #          
EAW95310   98 TREYGKIFKSHfgpqFVVSIAdRDMVAQVLRAEGAAPQRaNMESWREYRDLRGRaTGLISAEGEQWLKMRSVLRQRILKP 177 human
EOB02830   37 TQEYGKIFKSHfgpqFVVSIAdRDMVAQVLRAEGRAPQRaNMESWQEYRDLRGRaTGLISAEGEQWLKMRSVLRQKILKP 116 mallard
A8WGA0    102 AKKYGKIFKSRfgpqFVVSIAdRDMVAQVLRSESATPQRgNMESWKEYRDLRGRsTGLISAEGDEWLKMRSVLRQLIMRP 181 zebrafish
P0DOX0     98 IREYGRIFKSHfgpqFVVSIAdRDMVAQILRAERDAPQRaNMESWQEYRDLRGRsTGLISAEGKKWLAMRSVLRQKILRP 177 American bullfrog
Feature 1                                                                                     
EAW95310  178 KDVaiYSGEVNQVIADLIKRIYLLRSqaedgeTVTNVNDLFFKYSMEGVATILYESRLGClensipqlTVEYIEALELMF 257 human
EOB02830  117 QDVavYSGGVNEVITDLIKRIHTLRNqeddgeTVTNVNNLFFKYSMEGVATILYECRLGClennipqqTVEYIEALELMF 196 mallard
A8WGA0    182 RDVavFSSDVNDVVADLVKRVKTLRSqqddsqTVLNINDLFFKYAMEGVATILYETRLGCleneipkmSQEYITALHLMF 261 zebrafish
P0DOX0    178 RDVfiYAGGVNEVVSDLIKRIKTLRSreddgeTVTNVNDLYFKYSMEAVATILYECRLGClqnevpkqTLEYIEALELMF 257 American bullfrog
Feature 1                                                                                     
EAW95310  258 SMFKTSMYAGaiprWLRPFIPKPWREFCRSWDGLFKFSQIHVDNKLrdiqyqmdrgrrvsGGLLTYLFLSQaltLQEIYA 337 human
EOB02830  197 SMFKTTMYAGaipkWLRPLIPKPWKEFCRSWDGLFKFSQIHVDNKLkaiqsqldqgeevnGGLLTYLLVSKeltLEEIYA 276 mallard
A8WGA0    262 SSFKTTMYAGaipkWLRPIIPKPWEEFCSSWDGLFKFSQIHVDKRLseikkqmekseeikGGLLTHMLVTRemnLEEIYA 341 zebrafish
P0DOX0    258 SMFKTTMYAGaipkWLRPFIPKPWEEFCRSWDGLFRFSQIHVDGRLreiqacldrgeevkGGLLTSILISKeltLEELYA 337 American bullfrog
Feature 1         #  ##  ##  #                                                  #    ##  # #  
EAW95310  338 NVTEMLLAGVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGerhvptaaDVPKVPLVRALLKETLRLFPVLPGNGRVT 417 human
EOB02830  277 NMTEMLLAGVDTTSFTLSWATYLLAKHPEVQQRVYEEIVSNLGkdqvpgalDVPKLPLIRAVLKETLRLYPVLPGNGRVT 356 mallard
A8WGA0    342 NMTEMLLAGVDTTSFTLSWSTYLLARHPTIQQQIFEEVDRVLGgrvp-tgeDVPYLPLIRGLVKETLRLFPVLPGNGRVT 420 zebrafish
P0DOX0    338 NMTEMLLAGVDTTSFTLSWATYLLAKNPQAQQMVYDQIVQNLGkdtvptaeDVPKLPLIRAVLKETLRLFPVLPGNGRVT 417 American bullfrog
Feature 1                                                              ####  #####   #        
EAW95310  418 QEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRkgdlDRVDNFGSIPFGHGVRSCIGRRIAELEIHLVV 497 human
EOB02830  357 QKDLIVGGYLIPKGTQLALCHYATSYSEENFPMANEFRPERWLRkdnlDRVDNFGSIPFGYGIRSCIGKRIAELEIHLAL 436 mallard
A8WGA0    421 HDDLIVGGYLIPKGTQLALCHYSTSMDEENFPRPEEFRPDRWIRkdasDRVDNFGSIPFGYGIRSCIGRRIAELEMHLAL 500 zebrafish
P0DOX0    418 QDDLVLGGYLIPKGTQLALCHYSTSYDQEYFTAAEDFQPGRWLRhghlDRVENFGSIPFGYGIRSCIGKRVAELEIHLAL 497 American bullfrog
Feature 1                                      
EAW95310  498 IQLLQHFEIkTSSQTNAVHAKTHGLLTPGGPIH 530 human
EOB02830  437 IQLLQNFEIkVSPKTEPVHAKTHGLLTPGDSIN 469 mallard
A8WGA0    501 TQLLQNFHIeVSPQTTEVHAKTHGLLCPGASIN 533 zebrafish
P0DOX0    498 IQLLQNFEIrTSPKTQTVLPKTHGLLCPAGAIN 530 American bullfrog

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