2V62


Conserved Protein Domain Family
STKc_VRK2

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cd14123: STKc_VRK2 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine protein kinase, Vaccinia Related Kinase 2
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. VRKs were initially discovered due to its similarity to vaccinia virus B1R STK, which is important for viral replication. They play important roles in cell signaling, nuclear envelope dynamics, apoptosis, and stress responses. Vertebrates contain three VRK proteins. VRK2 exists as two alternative splice forms, A and B, which differ in their C-terminal regions. VRK2A, the predominant isoform, contains a hydrophobic tail and is anchored to the ER and mitochondria. It is expressed in all cell types. VRK2B lacks a membrane-anchor tail and is detected in the cytosol and the nucleus. Like VRK1, it can stabilize p53. VRK2B functionally replaces VRK1 in the nucleus of cell types where VRK1 is absent. VRK2 modulates hypoxia-induced stress responses by interacting with TAK1, an atypical MAPK kinase kinase which triggers cascades that activate JNK following oxidative stress. VRK2 also interacts with JIP1, a scaffold protein that assembles three consecutive members of a MAPK pathway. This interaction prevents the association of JNK with the signaling complex, leading to reduced phosphorylation and AP1-dependent transcription. The VRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 271025
Aligned: 4 rows
Threshold Bit Score: 589.894
Created: 6-Apr-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 26 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                           #####   #                 # #                                
2V62_A        26 PEGKVLDDMEgNQWVLGKkIGSGGFGLIYLAFPtnk--peKDARHVVKVEYQEnGPLFSELKFYQRVAKKdcIKKWIERK 103 human
AAH41230      13 PEGWKVTDTSkKSWRLGKmIGKGGFGLIYLASPqcdtpvgDDAVHVIKVEYHQnGPLFCELKFYQRAAKPdnITKWKAHK 92  African clawed ...
AAH49319      13 PDGCILTDSEkKNWRIGKmIGKGGFGLIYLASQdvnvpvrDDADFVIKVEYHEnGPLFSELKFYQRAAKPetMSKWMKSK 92  zebrafish
XP_002196914  16 PKDMILKDTEgKTWRLGSqIGQGGFGLIYLASPqtqvpveDDAVHVIKVEYLEnGPLFSELKFYQRAAKQehIRKWMNLK 95  zebra finch
Feature 1               #                   ####  # #                                     # # ## 
2V62_A       104 QLDYLGIPLFYGSGLTEFkGRSYRFMVMERLGiDLQKISGqn-gTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANL 182 human
AAH41230      93 KLDYLGIPKYWGSGETTFnSQSYRFMVMDRLGvDLQTILNknngKFSMQRVMQLGICMLDVLEFIHENEYVHCDIKAANI 172 African clawed ...
AAH49319      93 QLGFLGIPTYWGSGLTESnGTRYRFMVMDRLGtDLQKVLIdnggQLRKTSVLQLGVLMLDVLEYIHDNEYVHADIKAANL 172 zebrafish
XP_002196914  96 KIRCLGIPVFWGSGLAEYkGKSYRFMVMERLGqDLQRIFEdcgsRFKKETVLQLGARMLDTLEYIHENEYVHGDIKAANL 175 zebra finch
Feature 1        #            #  #                      ####                                     
2V62_A       183 LLGYkNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGvaLSRRSDVEILGYCMLRWLcGKLPWEQ 262 human
AAH41230     173 LLSYtNQTEVYLADYGLSYRYCPNGNHKEYKENPRKGHNGTIEFTSLDAHKGvaPSRRGDLEILAYCMLFWLcGSLPWDD 252 African clawed ...
AAH49319     173 LLGYrDPNKVYLADYGLSYRYCPNGEHKEYKENPKKGHNGTIEYTSIDAHKGvaASRRGDLEVLGYCLLHWQcGTLPWLP 252 zebrafish
XP_002196914 176 LLGYsNPHEVYLADYGLCYRYCPNGNHKQYQENPRKGHNGTIEFTSIDAHKGvaPSRRGDLEILGYCMLHWLcGKLPWEQ 255 zebra finch
Feature 1                                                                      
2V62_A       263 NlkDPVAVQTAKTNLLDELPQSVLKWapsgsSCCEIAQFLVCaHSLAYDEKPNYQALKKILN 324 human
AAH41230     253 NltNPTAVQDLKAKLLSNLPDSVVEWtagedGSYEIAMFMKEiCHLAYDAKPDYGALKRILS 314 African clawed frog
AAH49319     253 SlkNPAEVQEAKAKLMSNLPDSVLKMst-ssSSMEIAQFLSRvKDLGYNEKPDYQALRMVLS 313 zebrafish
XP_002196914 256 NlkDPVAVQSAKTKLMDELPDSVLRWdspgsSCSEIAKFLASvSGLAYAEKPKYQVLKKILL 317 zebra finch

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