1GXL,2WD5,3NWC,2WD5,3L51


Conserved Protein Domain Family
SMC_hinge

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smart00968: SMC_hinge 
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SMC proteins Flexible Hinge Domain
This entry represents the hinge region of the SMC (Structural Maintenance of Chromosomes) family of proteins. The hinge region is responsible for formation of the DNA interacting dimer. It is also possible that the precise structure of it is an essential determinant of the specificity of the DNA-protein interaction.
Statistics
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PSSM-Id: 214944
Aligned: 306 rows
Threshold Bit Score: 35.6696
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GXL_A         43 GLVDVVSNLIE-V-D-E-KYSLAVSVLLGGTAQNIVVRNVDTAKAIVEFlkqneagrvtILPLDLIDgs----fNRISGL 114  Thermotoga ma...
XP_629977     515 GVKGKLMDLCE-P-S-QrKYATALTLTMGKLMDAIIVDTEETLIGCVRYlkeqllgvatFISLDRLQmvkpinqQLRQIS 591  Dictyostelium...
NP_584776     502 GVYGRVVDLVKaT-Q-D-RYEIALSVLLGSHDQSVIVDTERTAMSCINFikekrlckmtFLPIESIRdgsegrgAGNASW 578  Encephalitozo...
NP_001190092  520 GVHGRMTDLCR-PnR-K-KYNLAVTVAMGRFMDAVVVEDENTGKDCIKYlkeqrlppmtFIPLQSVRvkq-----vfERL 591  thale cress
XP_002666865  514 tVYGRLVELCQ-P-IhK-KYQLAVTKVFGKNMNAIVVTSAYVAHDCIRYlkeeraepetFLPIDYIDvpi-lneRLREVQ 589  zebrafish
NP_001098324  511 NVYGRLSDLCS-P-IhK-KYQLAVTKVFGSNMNAIVVSSEKTARDCISFmkaeraepetFLPIDYLvvsp-lneRLREIP 586  Japanese medaka
EAW73381      514 SVFGRLFDLCH-P-IhK-KYQLAVTKVFGRFITAIVVASEKVAKDCIRFlkeeraepetFLALDYLDikp-ineRLRELK 589  human
NP_001027867  518 aVYGRLADLCS-P-IhK-KYQLAVTKVFGRYMNAIVVSSEKVARECISFikneraepetFLPIDYLDvsp-lneRLRTVP 593  torafugu
AAI60994      514 aVFGRLFELCH-P-IhK-KYQLAVTKVFGKYMNAIIVSTVQVARDCVKFlkeeraepetFLALDYLDikq-ineKLREIK 589  western clawe...
XP_416467     523 SVFGRLLDLCH-P-IhK-KYQLAVTKVFSKYMTAIVVATEKTARDCIQFlkqeraepetFLALDYLEvkp-ineRLREIK 598  chicken
1GXL_A        115 ENER--G-FVGYAVDLVK-F--------------------P-----SDLEVLGGFLFGNSVVVETLDDAIRM 157  Thermotoga maritima
XP_629977     592 GGGG--GsTAKLLFDCLK-I--------------------Q-----KGIEDAVLYALGNTVVCESLAEAKLL 635  Dictyostelium discoid...
NP_584776     579 EIEEygG-AVRRAVDAIT-Y--------------------D-----GKYRKVVSFLFREKLIADSVEIARDI 623  Encephalitozoon cunic...
NP_001190092  592 RNLG--G-TAKLVFDVIQ-YplhisevskiyifvlnystfD-----PELEKAVLYAVGNTLVCDELEEAKVL 654  thale cress
XP_002666865  590 --------GAKMVVDVVQ-C--------------------Sqn--aPQLKRVIQYVCGNSLVCETLKDARRI 630  zebrafish
NP_001098324  587 --------GAKMVVDVVQ-F--------------------NmstnaAQLKKVVQYVCGNALVCESIKDARSL 629  Japanese medaka
EAW73381      590 --------GCKMVIDVIK-T--------------------Qf----PQLKKVIQFVCGNGLVCETMEEARHI 628  human
NP_001027867  594 --------GAKMLVDVVQ-I--------------------SaavgvNQLRKAVHFVCGNTLVCESIKDAKSV 636  torafugu
AAI60994      590 --------GAKMMVDVIQtV--------------------S-----APLKKVIQFVCGNGLVCDSVKEAKRI 628  western clawed frog
XP_416467     599 --------GAKMIVDVVQ-T--------------------Pf----APLKRVIQFVSGNGLVCDTVKEARQI 637  chicken
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