1IO6,1GCQ,2VWF,2W0Z,1GRI


Conserved Protein Domain Family
SH3_GRB2_C

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cd11949: SH3_GRB2_C 
Click on image for an interactive view with Cn3D
C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2
GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212882
Aligned: 10 rows
Threshold Bit Score: 101.839
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligandVav SH3N-terminal SH3
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:RxxK motif ligands also bind to this site.
  • Structure:1IO6; Human GRB2 C-terminal SH3 domain binds a proline-rich peptide ligand (rhyrplpplp); contacts at 4A.
  • Citation:PMID 7881903
  • Structure:2VWF; Human GRB2 C-terminal domain binds Gab2 RxxK-motif peptide (iqpppvnrnl kpdrk); contacts at 4A.
  • Structure:2W0Z; Human GRB2 C-terminal SH3 domain binds Gab2 proline-rich peptide (appprppkp); contacts at 4A.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  ##  #               # ##            # # ##   
1IO6_A         4 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACH--GQTGMFPRNYVTP 56  human
1GCQ_A         4 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACH--GQTGMFPRNYVTP 56  human
2VWF_A         4 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACH--GQTGMFPRNYVTA 56  human
2W0Z_A         4 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACH--GQTGMFPRNYVTA 56  human
Q07883       160 YVQALFDFDPQEEGELGFRRGDFIQVLDNSDPNWWKGACH--GQTGMFPRNYVTP 212 chicken
Q6GPJ9       172 FVQALFDFDPQEDGELGFRRGDFIQVVDNSDPNWWKGTCL--GQTGMFPRNYVTP 224 African clawed frog
NP_001007770 160 YVQALFDFDPQEDGELGFRRGDFIQVLDNSDPNWWKGACH--GQTGMFPRNYVTP 212 zebrafish
EFW42880     189 TARALFDFTPQEPNELGFRKNDIIEIVDDSDANWWQGSCN--GQTGLFPSSYCQR 241 Capsaspora owczarzaki ATCC 30864
1GRI_A       160 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACH--GQTGMFPRNYVTP 212 Sumatran orangutan
XP_001630139 134 AVQALFDFEAQEEGEVSFKRGDCIEVIDNSDVNWWRGKVLttGEIGMFPSNYVKA 188 starlet sea anemone

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