2EAM,2KIV


Conserved Protein Domain Family
SAM_AIDA1AB-like_repeat1

?
cd09499: SAM_AIDA1AB-like_repeat1 
Click on image for an interactive view with Cn3D
SAM domain of AIDA1AB-like proteins, repeat 1
SAM (sterile alpha motif) domain repeat 1 of AIDA1AB-like proteins is a protein-protein interaction domain. AIDA1AB-like proteins have two tandem SAM domains. They may form an intramolecular head-to-tail homodimer. One of two basic motifs of the nuclear localization signal (NLS) is located within helix 5 of SAM2 (motif HKRK). This signal plays a role in decoupling of SAM2 from SAM1, thus facilitating translocation of this type proteins into the nucleus. SAM1 domain has a potential phosphorylation site for CMGC group of serine/threonine kinases. SAM domains of the AIDA1-like subfamily can directly bind ubiquitin and participate in regulating the degradation of ubiquitinated EphA receptors, particularly EPH-A8 receptor. Additionally AIDA1AB-like proteins may participate in the regulation of nucleoplasmic coilin protein interactions.
Statistics
?
PSSM-Id: 188898
Aligned: 13 rows
Threshold Bit Score: 105.073
Created: 8-Mar-2010
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
intramolecular
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:intramolecular dimer interface ML [polypeptide binding site]
Evidence:
  • Structure:2KIV; human intraprotein SAM1/SAM2_AIDA1 repeat dimer, contacts at 4 A.
  • Comment:ML surface of SAM1 repeat interacts with EH surface of SAM2 repeat forming internal dimer (in head-to-tail manner) in AIDA1 human protein.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                               #### # ##  ## ##  #  ##                      
2EAM_A         11 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMgSNVMEDQDLLEIGILNSGHRQRILQAIQLLPSGP 77   human
2KIV_A         13 SVQTVGQWLESIGLPQYENHLMANGFDNVQAMgSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMR 79   human
Q92625        697 LEQSVGEWLESIGLQQYESKLLLNGFDDVHFLgSNVMEEQDLRDIGISDPQHRRKLLQAARSLPKVK 763  human
A5PMU4        825 PVQSVGQWLDNIGLVQYENHLLSNGFDNVQFMgSNVVEDQDLLEIGILNSAHRQRLLQAIRLLPRVR 891  zebrafish
XP_418023     697 LEQSVGEWLESIGLQQYESKLLLNGFDDVRFLgCNVMEDQDLRDIGIGDPQHRRKLLQAARSLPKLK 763  chicken
XP_416168     807 PVQTVGQWLENIGLPQYENHLLANGFDNVQFMgSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMK 873  chicken
CAG04042      622 LEQPVGDWLEHVGLPQYESKLLLNGFDDLHYMgSNVMEDQDLKEIGIADASHRKKILHAARSLPKVK 688  spotted green pufferfish
XP_001635207   16 KAKTVAGWLDALGLPQYESDLVSNGFDDLNFFnGGILEDQDLLEIGVLDMSNRKILLEAVKSLPVHP 82   starlet sea anemone
NP_001084986  678 PEQSVAHWLKSIGLLQYESKLVLNGFDDVRFLaDTMMDDQDLVDIGITDQPHRRLILRAAHSLPVPP 744  African clawed frog
XP_001202744  104 GPQSIGAWLDSLNLGQYENMLIANGFDHLDFIgGGIIEEQDLMDIGIVEEIHRKMILEATRCLPIMK 170  purple urchin
XP_001602889  791 VVTLVGQWLSKLNLADYESLFLNYGFDDLEFIvSGVLDDSDLKDMGITSEQDRASILNAASMLNNRV 857  jewel wasp
EFA01808      899 NADSIEKWLQTLGMQDYVGLFMSNGFDDVNFL-NGVIEDCDLSEMGITSELERQIILDAVKQLPLKI 964  red flour beetle
XP_002423922  174 VLTKVGQWLSTMNLERYEKNFLDHGYDDVDFL-NGLLDKEELKNIGLTEEEEVAIVLKELNNLNCKI 239  human body louse

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap