1QPJ,2OG8,2OF2,3BYS,3LCK,3KXZ,1QPE


Conserved Protein Domain Family
PTKc_Lck_Blk

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cd05067: PTKc_Lck_Blk 
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Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk
PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lck/Blk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270652
Aligned: 12 rows
Threshold Bit Score: 538.703
Created: 22-May-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1QPJ; Human Lck tyr kinase binds inhibitor, staurosporine; defined at 3.5A contacts.
    View structure with Cn3D
  • Structure:2OG8; Human Lck tyr kinase binds the inhibitor, aminoquinazoline-36; defined at 3.5A contacts.
    View structure with Cn3D
  • Structure:2OF2; Human Lck tyr kinase binds the inhibitor, furanopyrimidine-8; defined at 3.5A contacts.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  #    #           # #              #                           #
1QPJ_A         7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86  human
2OG8_A         2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 81  human
2OF2_A         7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86  human
3BYS_A        13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 92  human
3LCK_A         7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86  human
3KXZ_A        15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 94  human
1QPE_A         7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT 86  human
P42683       236 EWEVPRESLKLVEKLGAGQFGEVWMGFYNGHTKVAIKNLKQGSMSPSAFLAEANLMKNLQHPRLVRLYAVVTKEPIYIIT 315 chicken
NP_001001596 230 EWEVPRESLKLERRLGQGQFGEVWMGLYNNNRQVAIKSLKPGTMSISAFLAEANLMKSLQHPRLVRLFAVVTQEPIYIIT 309 zebrafish
AAI29713     230 EWEIPRNNLQLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKSGTMSPEAFLAEANLMKQLQHPRLVRLNAVVTQEPIYIVT 309 African clawed ...
NP_001025391 214 EWEIPRETLKLVKKLGAGQFGEVWMGFYKNNQKVAIKTLKEGTMEPEAFLQEANLMKQLQHERLVKLHAVVTREPIYIVT 293 zebrafish
CAG09110      25 EWEIPRDTLKMVKKLGAGQFGEVWMGYYKNTQKVAIKTLKEGTMEPAAFLEEANLMKQLQHERLVRLHAVVTKEPILIVT 104 Tetraodon nigro...
Feature 1        ###   #                                        # #  # #          #              
1QPJ_A        87 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEXTA 166 human
2OG8_A        82 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEYTA 161 human
2OF2_A        87 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEYTA 166 human
3BYS_A        93 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEYTA 172 human
3LCK_A        87 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEXTA 166 human
3KXZ_A        95 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEXTA 174 human
1QPE_A        87 EYMeNGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEdNEXTA 166 human
P42683       316 EYMeKGSLVDFLKTSEGIKLSINKLLDMAAQIAEGMAFIEAKNYIHRDLRAANILVSEALCCKIADFGLARLIEdNEYTA 395 chicken
NP_001001596 310 EYMeNGSLVDFLKTPEGSDIPINTLIDMAAQVAEGMAYVEQKNYIHRDLRAANILVSHELTCKIADFGLARLIKnNEYTA 389 zebrafish
AAI29713     310 EYMeNGCLVDYLKTSEGLKLTIYKLIDMSAQVSEGMAFLERRNYIHRDLRAANILVSESLCCKIADFGLARIIVdNEYTA 389 African clawed ...
NP_001025391 294 EYMaNGSLLDFLKTDDGHKLKLSKLIDMTAQIAEGMAYIERKNYIHRDLRAANILVSETLHCKIADFGLARIIE-TEYTA 372 zebrafish
CAG09110     105 EFMvNGSLLDFLKSDAGKKLKVNKLIDMAAQIAEGMAYIEVKNYIHRDLRAANILVSETLHCKIADFGLARIIE-SEYTA 183 Tetraodon nigro...
Feature 1                                                                                        
1QPJ_A       167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 220 human
2OG8_A       162 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 215 human
2OF2_A       167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 220 human
3BYS_A       173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 226 human
3LCK_A       167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 220 human
3KXZ_A       175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 228 human
1QPE_A       167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------------------------NPEVI 220 human
P42683       396 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--------------------------NPEVI 449 chicken
NP_001001596 390 REGAKFPIKWTAPEAINYGTFSIKSDVWSFGVLLTEIVTYGRIPYPGMT--------------------------NPEVI 443 zebrafish
AAI29713     390 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGVLLTEIVTYGRIPYPGMT--------------------------NPEVI 443 African clawed ...
NP_001025391 373 QEGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------------------------NPEVI 426 zebrafish
CAG09110     184 QEGAKFPIKWTAPEAINFGTFSIKSDVWSFGILLTEIVTFGRIPYPGRRrpqprgsaafqrasevspvvfppgmtNPEVI 263 Tetraodon nigro...
Feature 1                                                          
1QPJ_A       221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 human
2OG8_A       216 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265 human
2OF2_A       221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 human
3BYS_A       227 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276 human
3LCK_A       221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 human
3KXZ_A       229 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 278 human
1QPE_A       221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 human
P42683       450 QNLERGYRMPQPDNCPQELYELMMQCWKEQPEERPTFEYMKSVLEDFFTA 499 chicken
NP_001001596 444 ANLERGYRMPCPDNCPEALYNVMKHCWTENPDNRPTFEFLRSVLEDFFTA 493 zebrafish
AAI29713     444 ENLERGYRMPQPDNCPMELYELMVRCWKEEPEERPTFEFLRSLLEDFFTA 493 African clawed frog
NP_001025391 427 RNLDRNYRMPCPDACPGELYDIMTKCWMEKPEDRPTFEYLQDTLNDFFIA 476 zebrafish
CAG09110     264 RNLERLYRMPRPEGCPAELYEVMMTCWKEKPEERPTFEFLQNILNDFFIA 313 Tetraodon nigroviridis

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