2FEI,3U23


Conserved Protein Domain Family
SH3_CD2AP_2

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cd12054: SH3_CD2AP_2 
Click on image for an interactive view with Cn3D
Second Src Homology 3 domain (SH3B) of CD2-associated protein
CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CD2AP. SH3B binds to c-Cbl in a site (TPSSRPLR is the core binding motif) distinct from the c-Cbl/SH3A binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212987
Aligned: 5 rows
Threshold Bit Score: 98.8859
Created: 3-Jun-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Structure:2U23: human Cms bind a proline-rich peptide from human Rin3, contacts at 4A.
  • Comment:based on the binding of the first SH3 (SH3A) domains of human CMS and CIN85 to Cbl-b peptide, and on the binding of the second SH3 (SH3B) domain of human CMS to Rin3 peptide
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #####              ##### #      # # # ##    
2FEI_A         2 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKEL 56  human
NP_001086432 109 RQCKVLYEYVPQNEDELELNVGEILDVIEEVEEGWWRGSNSGKSGLFPSNFVKEL 163 African clawed frog
NP_001008583 126 RQCKVLFEYVPQNEDELELKVGEIIEITEEVEEGWWSGSMNGKSGLFPSNFVKEI 180 zebrafish
CAG31983     111 RQCKVLFEYLPQNEDELELKVGDVIDISEEVEEGWWSGTLNGKSGLFPSNFVKEL 165 chicken
3U23_A         8 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKEL 62  human

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