esv3310437
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,072
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 151 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 151 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 13 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310437 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 48,089,291 | 48,089,291 | 48,090,362 | 48,090,362 |
| esv3310437 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 46,166,653 | 46,166,653 | 46,167,724 | 46,167,724 |
| esv3310437 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000017.9 | Chr17 | 43,521,652 | 43,522,723 | 43,521,652 | 43,522,723 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843537 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843537 | Remapped | Perfect | NC_000017.11:g.(48 089291_48089291)_( 48090362_48090362) ins1694 | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 48,089,291 | 48,089,291 | 48,090,362 | 48,090,362 |
| essv7843537 | Remapped | Perfect | NC_000017.10:g.(46 166653_46166653)_( 46167724_46167724) ins1694 | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 46,166,653 | 46,166,653 | 46,167,724 | 46,167,724 |
| essv7843537 | Submitted genomic | NC_000017.9:g.(435 21652_43522723)_(4 3521652_43522723)i ns1694 | NCBI36 (hg18) | NC_000017.9 | Chr17 | 43,521,652 | 43,522,723 | 43,521,652 | 43,522,723 |