esv3310516
- Organism: Homo sapiens
- Study:estd59 (1000 Genomes Consortium Pilot Project)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,871
- Publication(s):1000 Genomes Project Consortium et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 111 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 111 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 17 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv3310516 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 51,595,384 | 51,597,254 | 51,595,384 | 51,597,254 |
| esv3310516 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 51,629,400 | 51,631,270 | 51,629,400 | 51,631,270 |
| esv3310516 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 51,604,440 | 51,606,310 | 51,604,440 | 51,606,310 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv7843530 | novel sequence insertion | SAMN00001696 | Sequencing | Paired-end mapping | 44,056 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv7843530 | Remapped | Perfect | NC_000003.12:g.(51 595384_51597254)_( 51595384_51597254) ins1097 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 51,595,384 | 51,597,254 | 51,595,384 | 51,597,254 |
| essv7843530 | Remapped | Perfect | NC_000003.11:g.(51 629400_51631270)_( 51629400_51631270) ins1097 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 51,629,400 | 51,631,270 | 51,629,400 | 51,631,270 |
| essv7843530 | Submitted genomic | NC_000003.10:g.(51 604440_51606310)_( 51604440_51606310) ins1097 | NCBI36 (hg18) | NC_000003.10 | Chr3 | 51,604,440 | 51,606,310 | 51,604,440 | 51,606,310 |