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esv3330777

  • Variant Calls:6
  • Validation:Fail
  • Clinical Assertions: No
  • Region Size:45,415

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 231 SVs from 38 studies. See in: genome view    
Remapped(Score: Perfect):157,017,698-157,063,255Question Mark
Overlapping variant regions from other studies: 231 SVs from 38 studies. See in: genome view    
Remapped(Score: Perfect):156,444,709-156,490,266Question Mark
Overlapping variant regions from other studies: 74 SVs from 11 studies. See in: genome view    
Submitted genomic156,377,287-156,422,844Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
esv3330777RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
esv3330777RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
esv3330777Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
essv7913213deletionSAMN00001544SequencingPaired-end mapping15,303
essv7913214deletionSAMN00001530SequencingPaired-end mapping9,564
essv7913215deletionSAMN00001538SequencingPaired-end mapping26,254
essv7913216deletionSAMN00801680SequencingPaired-end mapping19,937
essv7913217deletionSAMN00801241SequencingPaired-end mapping14,163
essv7913218deletionSAMN00001529SequencingPaired-end mapping15,109

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
essv7913213RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913214RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913215RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913216RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913217RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913218RemappedPerfectNC_000005.10:g.(15
7017698_157017898)
_(157063065_157063
255)del		GRCh38.p12First PassNC_000005.10Chr5157,017,771 (-73, +127)157,063,185 (-120, +70)
essv7913213RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913214RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913215RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913216RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913217RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913218RemappedPerfectNC_000005.9:g.(156
444709_156444909)_
(156490076_1564902
66)del		GRCh37.p13First PassNC_000005.9Chr5156,444,782 (-73, +127)156,490,196 (-120, +70)
essv7913213Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)
essv7913214Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)
essv7913215Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)
essv7913216Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)
essv7913217Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)
essv7913218Submitted genomicNC_000005.8:g.(156
377287_156377487)_
(156422654_1564228
44)del		NCBI36 (hg18)NC_000005.8Chr5156,377,360 (-73, +127)156,422,774 (-120, +70)

Validation Information

Variant Call IDExperiment IDSample IDMethodAnalysisResult
essv791321836SAMN00001529Digital arrayOtherFail
essv791321838SAMN00001529Digital arrayOtherFail
essv791321436SAMN00001530Digital arrayOtherFail
essv791321438SAMN00001530Digital arrayOtherFail
essv791321536SAMN00001538Digital arrayOtherFail
essv791321538SAMN00001538Digital arrayOtherFail
essv791321336SAMN00001544Digital arrayOtherFail
essv791321338SAMN00001544Digital arrayOtherFail
essv791321736SAMN00801241Digital arrayOtherFail
essv791321738SAMN00801241Digital arrayOtherFail
essv791321636SAMN00801680Digital arrayOtherFail
essv791321638SAMN00801680Digital arrayOtherFail

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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