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dbVar

Database of genomic structural variation

esv3864586

Organism: Homo sapiens

Study:estd219 (1000 Genomes Consortium Phase 3 Integrated SV)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:222

Publication(s):1000 Genomes Consortium Phase 3 Integrated SV

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 76 SVs from 18 studies. See in: genome view

Remapped(Score: Perfect):76,796,824-76,797,045

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3864586	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	76,796,824	76,797,045
esv3864586	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	76,507,868	76,508,089

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv22490321	deletion	HG02164	Sequencing	Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping	Heterozygous	3,390

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv22490321	Remapped	Perfect	NC_000011.10:g.767 96824_76797045del	GRCh38.p12	First Pass	NC_000011.10	Chr11	76,796,824	76,797,045
essv22490321	Submitted genomic		NC_000011.9:g.7650 7868_76508089del	GRCh37 (hg19)		NC_000011.9	Chr11	76,507,868	76,508,089

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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