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dbVar

Database of genomic structural variation

esv3872331

Organism: Homo sapiens

Study:estd219 (1000 Genomes Consortium Phase 3 Integrated SV)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:10,436

Publication(s):1000 Genomes Consortium Phase 3 Integrated SV

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 179 SVs from 34 studies. See in: genome view

Remapped(Score: Perfect):27,357,014-27,367,678

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3872331	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	27,357,151 (-137, +0)	27,367,586 (-0, +92)
esv3872331	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	27,826,357 (-137, +0)	27,836,792 (-0, +92)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
essv23407910	deletion	HG02836	Sequencing	Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping	Heterozygous	3,862

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv23407910	Remapped	Perfect	NC_000014.9:g.(273 57014_27357151)_(2 7367586_27367678)d el	GRCh38.p12	First Pass	NC_000014.9	Chr14	27,357,151 (-137, +0)	27,367,586 (-0, +92)
essv23407910	Submitted genomic		NC_000014.8:g.(278 26220_27826357)_(2 7836792_27836884)d el	GRCh37 (hg19)		NC_000014.8	Chr14	27,826,357 (-137, +0)	27,836,792 (-0, +92)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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