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dbVar

Database of genomic structural variation

esv4008949

Organism: Homo sapiens

Study:estd231 (Wong et al. 2017)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:59,417

Publication(s):Wong et al. 2017

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 235 SVs from 42 studies. See in: genome view

Remapped(Score: Perfect):112,664,934-112,724,350

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv4008949	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	112,664,934	112,724,350
esv4008949	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	112,383,781	112,443,197

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype
essv26065355	inversion	Sequencing	Split read and paired-end mapping	Juvenile idiopathic arthritis

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv26065355	Remapped	Perfect	NC_000003.12:g.112 664934_112724350in v	GRCh38.p12	First Pass	NC_000003.12	Chr3	112,664,934	112,724,350
essv26065355	Submitted genomic		NC_000003.11:g.112 383781_112443197in v	GRCh37 (hg19)		NC_000003.11	Chr3	112,383,781	112,443,197

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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