nsv1032866
- Organism: Homo sapiens
- Study:nstd100 (Coe et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:285,685
- Publication(s):Coe et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1113 SVs from 77 studies. See in: genome view
Overlapping variant regions from other studies: 1113 SVs from 77 studies. See in: genome view
Overlapping variant regions from other studies: 308 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1032866 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 15,297,206 | 15,582,890 |
| nsv1032866 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 15,336,831 | 15,622,515 |
| nsv1032866 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 15,303,356 | 15,589,040 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3643179 | copy number loss | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3643179 | Remapped | Perfect | NC_000007.14:g.(?_ 15297206)_(1558289 0_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 15,297,206 | 15,582,890 |
| nssv3643179 | Remapped | Perfect | NC_000007.13:g.(?_ 15336831)_(1562251 5_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 15,336,831 | 15,622,515 |
| nssv3643179 | Submitted genomic | NC_000007.12:g.(?_ 15303356)_(1558904 0_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 15,303,356 | 15,589,040 |