nsv1032848
- Organism: Homo sapiens
- Study:nstd100 (Coe et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:12
- Validation:Not tested
- Clinical Assertions: No
- Region Size:85,002
- Publication(s):Coe et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1008 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 2256 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 697 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1032848 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nsv1032848 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nsv1032848 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3661590 | copy number loss | SNP array | Probe signal intensity |
| nssv3661591 | copy number loss | SNP array | Probe signal intensity |
| nssv3661592 | copy number loss | SNP array | Probe signal intensity |
| nssv3661593 | copy number loss | SNP array | Probe signal intensity |
| nssv3661594 | copy number loss | SNP array | Probe signal intensity |
| nssv3661595 | copy number loss | SNP array | Probe signal intensity |
| nssv3661596 | copy number loss | SNP array | Probe signal intensity |
| nssv3661597 | copy number loss | SNP array | Probe signal intensity |
| nssv3661598 | copy number loss | SNP array | Probe signal intensity |
| nssv3661599 | copy number loss | SNP array | Probe signal intensity |
| nssv3661600 | copy number loss | SNP array | Probe signal intensity |
| nssv3661601 | copy number loss | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3661590 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661591 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661592 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661593 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661594 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661595 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661596 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661597 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661598 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661599 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661600 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661601 | Remapped | Pass | NC_000007.14:g.(?_ 62209431)_(6229443 2_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,209,431 | 62,294,432 |
| nssv3661590 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661591 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661592 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661593 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661594 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661595 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661596 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661597 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661598 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661599 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661600 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661601 | Remapped | Perfect | NC_000007.13:g.(?_ 61728395)_(6188812 8_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,728,395 | 61,888,128 |
| nssv3661590 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661591 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661592 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661593 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661594 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661595 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661596 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661597 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661598 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661599 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661600 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 | ||
| nssv3661601 | Submitted genomic | NC_000007.12:g.(?_ 61365830)_(6152556 3_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,365,830 | 61,525,563 |