nsv1187133

Organisms: Homo sapiens neanderthalensis, Homo sapiens ssp. Denisova, Homo sapiens

Study:nstd112 (Sudmant et al. 2015)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:226
Validation:Not tested
Clinical Assertions: No
Region Size:2,391

Publication(s):Sudmant et al. 2015

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 509 SVs from 29 studies. See in: genome view

Remapped(Score: Perfect):155,457,657-155,460,047

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv1187133	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nsv1187133	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	154,687,318	154,689,708

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv7457360	copy number variation	SAMEA1706756	Sequencing	Read depth	4	14,591
nssv7457361	copy number variation	SAMEA2164595	Sequencing	Read depth	2	14,625
nssv7457362	copy number variation	SAMEA2164384	Sequencing	Read depth	2	14,564
nssv7457363	copy number variation	SAMEA2164391	Sequencing	Read depth	2	14,595
nssv7457364	copy number variation	SAMEA2164386	Sequencing	Read depth	2	14,641
nssv7457365	copy number variation	SAMEA2164390	Sequencing	Read depth	2	14,669
nssv7457366	copy number variation	SAMEA2164160	Sequencing	Read depth	2	14,556
nssv7457367	copy number variation	SAMEA2164164	Sequencing	Read depth	2	14,628
nssv7457368	copy number variation	SAMN03783154	Sequencing	Read depth	2	14,532
nssv7457369	copy number variation	SAMN03783155	Sequencing	Read depth	2	14,583
nssv7457370	copy number variation	SAMN01036798	Sequencing	Read depth	4	14,574
nssv7457371	copy number variation	SAMN01036803	Sequencing	Read depth	2	14,603
nssv7457372	copy number variation	SAMN00779933	Sequencing	Read depth	2	14,586
nssv7457373	copy number variation	SAMN00779943	Sequencing	Read depth	4	14,621
nssv7457374	copy number variation	SAMN03783156	Sequencing	Read depth	4	14,581
nssv7457375	copy number variation	SAMN00001044	Sequencing	Read depth	4	14,529
nssv7457376	copy number variation	SAMN00001060	Sequencing	Read depth	2	14,536
nssv7457377	copy number variation	SAMN03783157	Sequencing	Read depth	4	14,647
nssv7457378	copy number variation	SAMN03783158	Sequencing	Read depth	4	14,668
nssv7457379	copy number variation	SAMEA2164453	Sequencing	Read depth	2	14,636
nssv7457380	copy number variation	SAMN00008078	Sequencing	Read depth	2	14,451
nssv7457381	copy number variation	SAMN00008106	Sequencing	Read depth	2	14,556
nssv7457382	copy number variation	SAMEA2164153	Sequencing	Read depth	2	14,487
nssv7457383	copy number variation	SAMN02603792	Sequencing	Read depth	4	14,497
nssv7457384	copy number variation	SAMN01036781	Sequencing	Read depth	2	14,494
nssv7457385	copy number variation	SAMN01036783	Sequencing	Read depth	4	14,544
nssv7457386	copy number variation	SAMEA2164490	Sequencing	Read depth	2	14,660
nssv7457387	copy number variation	SAMN02603829	Sequencing	Read depth	4	14,639
nssv7457388	copy number variation	SAMN03783159	Sequencing	Read depth	2	14,494
nssv7457389	copy number variation	SAMEA1706724	Sequencing	Read depth	2	14,499
nssv7457390	copy number variation	SAMN02603818	Sequencing	Read depth	2	14,636
nssv7457391	copy number variation	SAMN02603821	Sequencing	Read depth	2	14,590
nssv7457392	copy number variation	SAMN03783160	Sequencing	Read depth	4	14,691
nssv7457393	copy number variation	SAMN03783161	Sequencing	Read depth	4	14,683
nssv7457394	copy number variation	SAMEA2164340	Sequencing	Read depth	2	14,576
nssv7457395	copy number variation	SAMEA2164175	Sequencing	Read depth	2	14,530
nssv7457396	copy number variation	SAMN03783162	Sequencing	Read depth	2	14,644
nssv7457397	copy number variation	SAMEA2164380	Sequencing	Read depth	2	14,669
nssv7457398	copy number variation	SAMN03783163	Sequencing	Read depth	4	14,670
nssv7457399	copy number variation	SAMN02603802	Sequencing	Read depth	4	14,703
nssv7457400	copy number variation	SAMN02603804	Sequencing	Read depth	4	14,669
nssv7457401	copy number variation	SAMN03783164	Sequencing	Read depth	4	14,599
nssv7457402	copy number variation	SAMN03783165	Sequencing	Read depth	4	14,756
nssv7457403	copy number variation	SAMN03783166	Sequencing	Read depth	2	14,670
nssv7457404	copy number variation	SAMN03783167	Sequencing	Read depth	4	14,675
nssv7457405	copy number variation	SAMEA1706748	Sequencing	Read depth	4	14,594
nssv7457406	copy number variation	SAMN03783168	Sequencing	Read depth	4	14,640
nssv7457407	copy number variation	SAMN03783169	Sequencing	Read depth	4	14,665
nssv7457408	copy number variation	SAMEA2164395	Sequencing	Read depth	2	14,620
nssv7457409	copy number variation	SAMN03783170	Sequencing	Read depth	4	14,618
nssv7457410	copy number variation	SAMN03783171	Sequencing	Read depth	4	14,288
nssv7457411	copy number variation	SAMN03783172	Sequencing	Read depth	4	14,778
nssv7457412	copy number variation	SAMN03783173	Sequencing	Read depth	4	14,664
nssv7457413	copy number variation	SAMN03783174	Sequencing	Read depth	2	14,675
nssv7457414	copy number variation	SAMEA1487354	Sequencing	Read depth	6	13,715
nssv7457415	copy number variation	SAMEA1706711	Sequencing	Read depth	5	14,408
nssv7457416	copy number variation	SAMN03783175	Sequencing	Read depth	2	14,638
nssv7457417	copy number variation	SAMN03783176	Sequencing	Read depth	2	14,619
nssv7457418	copy number variation	SAMN03783177	Sequencing	Read depth	2	14,680
nssv7457419	copy number variation	SAMN03783178	Sequencing	Read depth	2	14,666
nssv7457420	copy number variation	SAMN02603795	Sequencing	Read depth	4	14,463
nssv7457421	copy number variation	SAMEA2164252	Sequencing	Read depth	2	14,683
nssv7457422	copy number variation	SAMEA2164535	Sequencing	Read depth	2	14,624
nssv7457423	copy number variation	SAMEA1706737	Sequencing	Read depth	4	14,566
nssv7457424	copy number variation	SAMN03783179	Sequencing	Read depth	4	14,391
nssv7457425	copy number variation	SAMEA1706731	Sequencing	Read depth	4	14,659
nssv7457426	copy number variation	SAMEA1706716	Sequencing	Read depth	4	14,592
nssv7457427	copy number variation	SAMEA2164290	Sequencing	Read depth	2	14,669
nssv7457428	copy number variation	SAMEA2164480	Sequencing	Read depth	2	14,476
nssv7457429	copy number variation	SAMN03783180	Sequencing	Read depth	4	14,565
nssv7457430	copy number variation	SAMN03783181	Sequencing	Read depth	2	14,709
nssv7457431	copy number variation	SAMN03783182	Sequencing	Read depth	4	14,676
nssv7457432	copy number variation	SAMN00001633	Sequencing	Read depth	2	14,518
nssv7457433	copy number variation	SAMN00249816	Sequencing	Read depth	4	14,499
nssv7457434	copy number variation	SAMN00249822	Sequencing	Read depth	2	14,670
nssv7457435	copy number variation	SAMN03783183	Sequencing	Read depth	4	14,720
nssv7457436	copy number variation	SAMN00798868	Sequencing	Read depth	2	14,640
nssv7457437	copy number variation	SAMEA2164540	Sequencing	Read depth	2	14,622
nssv7457438	copy number variation	SAMEA1706757	Sequencing	Read depth	4	14,601
nssv7457439	copy number variation	SAMEA2164448	Sequencing	Read depth	2	14,687
nssv7457440	copy number variation	SAMN03783184	Sequencing	Read depth	4	14,718
nssv7457441	copy number variation	SAMEA1706740	Sequencing	Read depth	4	14,672
nssv7457442	copy number variation	SAMEA2164473	Sequencing	Read depth	2	14,607
nssv7457443	copy number variation	SAMEA2164552	Sequencing	Read depth	2	14,643
nssv7457444	copy number variation	SAMEA2164557	Sequencing	Read depth	2	14,620
nssv7457445	copy number variation	SAMEA1706733	Sequencing	Read depth	4	14,466
nssv7457446	copy number variation	SAMEA2164456	Sequencing	Read depth	2	14,524
nssv7457447	copy number variation	SAMN03783185	Sequencing	Read depth	4	14,639
nssv7457448	copy number variation	SAMEA2164550	Sequencing	Read depth	2	14,592
nssv7457449	copy number variation	SAMN03783186	Sequencing	Read depth	2	14,725
nssv7457450	copy number variation	SAMN03783187	Sequencing	Read depth	4	14,688
nssv7457451	copy number variation	SAMEA2164561	Sequencing	Read depth	2	14,640
nssv7457452	copy number variation	SAMN03783188	Sequencing	Read depth	4	14,511
nssv7457453	copy number variation	SAMEA2164415	Sequencing	Read depth	2	14,657
nssv7457454	copy number variation	SAMEA1706717	Sequencing	Read depth	4	14,656
nssv7457455	copy number variation	SAMEA2164522	Sequencing	Read depth	2	14,637
nssv7457456	copy number variation	SAMN03783189	Sequencing	Read depth	4	14,403
nssv7457457	copy number variation	SAMEA2164485	Sequencing	Read depth	2	14,504
nssv7457458	copy number variation	SAMEA2164489	Sequencing	Read depth	2	14,665
nssv7457459	copy number variation	SAMEA2164437	Sequencing	Read depth	2	14,735

Showing 100 of 226

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv7457360	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457361	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457362	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457363	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457364	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457365	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457366	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457367	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457368	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457369	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457370	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457371	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457372	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457373	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457374	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457375	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457376	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457377	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457378	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457379	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457380	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457381	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457382	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457383	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457384	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457385	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457386	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457387	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457388	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457389	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457390	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457391	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457392	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457393	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457394	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457395	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457396	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457397	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457398	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457399	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457400	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457401	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457402	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457403	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457404	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457405	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457406	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457407	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457408	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457409	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457410	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457411	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457412	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457413	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457414	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457415	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457416	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457417	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457418	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457419	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457420	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457421	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457422	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457423	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457424	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457425	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457426	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457427	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457428	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457429	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457430	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457431	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457432	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457433	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457434	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457435	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457436	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457437	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457438	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457439	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457440	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457441	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457442	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457443	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457444	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457445	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457446	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457447	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457448	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457449	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457450	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457451	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457452	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457453	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457454	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457455	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457456	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457457	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457458	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047
nssv7457459	Remapped	Perfect	GRCh38.p12	First Pass	NC_000023.11	ChrX	155,457,657	155,460,047

Showing 100 of 452

dbVar

Database of genomic structural variation

nsv1187133

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant