nsv1191921
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:220,708
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1370 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 1372 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 547 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1191921 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 4,277,560 | 4,498,267 |
| nsv1191921 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 4,277,560 | 4,498,267 |
| nsv1191921 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 4,267,560 | 4,488,267 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7472459 | copy number gain | 22437 | Oligo aCGH | Probe signal intensity | nssv7461229, nssv7473432, nssv7474956 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7472459 | Remapped | Perfect | NC_000009.12:g.(?_ 4277560)_(4498267_ ?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 4,277,560 | 4,498,267 |
| nssv7472459 | Remapped | Perfect | NC_000009.11:g.(?_ 4277560)_(4498267_ ?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 4,277,560 | 4,498,267 |
| nssv7472459 | Submitted genomic | NC_000009.10:g.(?_ 4267560)_(4488267_ ?)dup | NCBI36 (hg18) | NC_000009.10 | Chr9 | 4,267,560 | 4,488,267 |