nsv1192153
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,568,162
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 4803 SVs from 113 studies. See in: genome view
Overlapping variant regions from other studies: 4803 SVs from 113 studies. See in: genome view
Overlapping variant regions from other studies: 1520 SVs from 35 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1192153 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 170,632,266 | 172,200,427 |
| nsv1192153 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 171,553,417 | 173,121,578 |
| nsv1192153 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 171,789,992 | 173,358,153 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7468545 | copy number gain | 14086 | Oligo aCGH | Probe signal intensity | nssv7463046, nssv7463096, nssv7470130 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7468545 | Remapped | Perfect | NC_000004.12:g.(?_ 170632266)_(172200 427_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 170,632,266 | 172,200,427 |
| nssv7468545 | Remapped | Perfect | NC_000004.11:g.(?_ 171553417)_(173121 578_?)dup | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 171,553,417 | 173,121,578 |
| nssv7468545 | Submitted genomic | NC_000004.10:g.(?_ 171789992)_(173358 153_?)dup | NCBI36 (hg18) | NC_000004.10 | Chr4 | 171,789,992 | 173,358,153 |