nsv1196675
- Organism: Homo sapiens
- Study:nstd113 (Polyak et al. 2015)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,282,358
- Publication(s):Polyak et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 55329 SVs from 138 studies. See in: genome view
Overlapping variant regions from other studies: 55326 SVs from 138 studies. See in: genome view
Overlapping variant regions from other studies: 16546 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1196675 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 82,560,914 | 101,843,271 |
| nsv1196675 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 83,229,664 | 102,383,474 |
| nsv1196675 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 81,026,719 | 100,200,997 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv7467793 | copy number gain | 21441 | Oligo aCGH | Probe signal intensity | nssv7460047, nssv7470631 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7467793 | Remapped | Good | NC_000015.10:g.(?_ 82560914)_(1018432 71_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 82,560,914 | 101,843,271 |
| nssv7467793 | Remapped | Good | NC_000015.9:g.(?_8 3229664)_(10238347 4_?)dup | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 83,229,664 | 102,383,474 |
| nssv7467793 | Submitted genomic | NC_000015.8:g.(?_8 1026719)_(10020099 7_?)dup | NCBI36 (hg18) | NC_000015.8 | Chr15 | 81,026,719 | 100,200,997 |