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nsv1879196

  • Variant Calls:6
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:15
  • Description:MOTIF=[T],NS=[301],REF=[15.0],RL=[15],RU=[T],R
    PA=[12.0,13.0,14.0,16.0,17.0],QUAL=[74553]
  • Publication(s):Mallick et al. 2016

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 127 SVs from 17 studies. See in: genome view    
Remapped(Score: Perfect):50,868,146-50,868,160Question Mark
Overlapping variant regions from other studies: 126 SVs from 17 studies. See in: genome view    
Submitted genomic48,945,507-48,945,521Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv1879196RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000017.11Chr1750,868,14650,868,160
nsv1879196Submitted genomicGRCh37 (hg19)Primary AssemblyNC_000017.10Chr1748,945,50748,945,521

Variant Call Information

Variant Call IDTypeRepeat MotifMethodAnalysis
nssv10402309short tandem repeat(T) 14SequencingGenotyping
nssv10402310short tandem repeat(T) 16SequencingGenotyping
nssv10402311short tandem repeat(T) 13SequencingGenotyping
nssv10402312short tandem repeat(T) 17SequencingGenotyping
nssv10402313short tandem repeat(T) 12SequencingGenotyping
nssv10402314short tandem repeat(T) 15 (ref)SequencingGenotyping

Variant Call Placement Information

Variant Call IDPlacement TypeScoreAssemblyReciprocitySequence IDChrStartStop
nssv10402309RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402310RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402311RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402312RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402313RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402314RemappedPerfectGRCh38.p12First PassNC_000017.11Chr1750,868,14650,868,160
nssv10402309Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521
nssv10402310Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521
nssv10402311Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521
nssv10402312Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521
nssv10402313Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521
nssv10402314Submitted genomicGRCh37 (hg19)NC_000017.10Chr1748,945,50748,945,521

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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