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dbVar

Database of genomic structural variation

nsv3379187

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 204 SVs from 44 studies. See in: genome view

Submitted genomic177,096,953-177,096,953

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3379187	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	177,096,953	177,096,953
nsv3379187	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14712177	insertion	SAMN05603729	Sequencing	de novo and local sequence assembly	24,108
nssv14712314	insertion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14720715	insertion	SAMN05603847	Sequencing	de novo and local sequence assembly	26,021
nssv14722138	insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14726630	insertion	SAMN02744161	Sequencing	de novo and local sequence assembly	20,941
nssv14727027	insertion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009
nssv14729252	insertion	SAMN09651199	Sequencing	de novo and local sequence assembly	27,381
nssv14730973	insertion	SAMN05181962	Sequencing	de novo and local sequence assembly	23,563
nssv14731762	insertion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14712177	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14712314	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14720715	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14722138	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14726630	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14727027	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14729252	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14730973	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14731762	Submitted genomic		NC_000005.10:g.177 096953_177096954in s99	GRCh38 (hg38)		NC_000005.10	Chr5	177,096,953	177,096,953
nssv14712177	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14712314	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14720715	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14722138	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14726630	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14727027	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14729252	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14730973	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954
nssv14731762	Remapped	Perfect	NC_000005.9:g.1765 23954_176523955ins 99NC_000005.9:g.17 6523954_176523955i ns99	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,523,954	176,523,954

Showing 18 of 27

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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