Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv3397763

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 201 SVs from 41 studies. See in: genome view

Submitted genomic177,097,110-177,097,110

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3397763	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	177,097,110	177,097,110
nsv3397763	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14717182	insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14726690	insertion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631
nssv14728031	insertion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14729268	insertion	SAMN05603847	Sequencing	de novo and local sequence assembly	26,021
nssv14729843	insertion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14717182	Submitted genomic		NC_000005.10:g.177 097110_177097111in s72	GRCh38 (hg38)		NC_000005.10	Chr5	177,097,110	177,097,110
nssv14726690	Submitted genomic		NC_000005.10:g.177 097110_177097111in s72	GRCh38 (hg38)		NC_000005.10	Chr5	177,097,110	177,097,110
nssv14728031	Submitted genomic		NC_000005.10:g.177 097110_177097111in s72	GRCh38 (hg38)		NC_000005.10	Chr5	177,097,110	177,097,110
nssv14729268	Submitted genomic		NC_000005.10:g.177 097110_177097111in s72	GRCh38 (hg38)		NC_000005.10	Chr5	177,097,110	177,097,110
nssv14729843	Submitted genomic		NC_000005.10:g.177 097110_177097111in s72	GRCh38 (hg38)		NC_000005.10	Chr5	177,097,110	177,097,110
nssv14717182	Remapped	Perfect	NC_000005.9:g.1765 24111_176524112ins 72NC_000005.9:g.17 6524111_176524112i ns72	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111
nssv14726690	Remapped	Perfect	NC_000005.9:g.1765 24111_176524112ins 72NC_000005.9:g.17 6524111_176524112i ns72	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111
nssv14728031	Remapped	Perfect	NC_000005.9:g.1765 24111_176524112ins 72NC_000005.9:g.17 6524111_176524112i ns72	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111
nssv14729268	Remapped	Perfect	NC_000005.9:g.1765 24111_176524112ins 72NC_000005.9:g.17 6524111_176524112i ns72	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111
nssv14729843	Remapped	Perfect	NC_000005.9:g.1765 24111_176524112ins 72NC_000005.9:g.17 6524111_176524112i ns72	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,524,111	176,524,111

Showing 10 of 15

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI