nsv3957863
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:copy number variation
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:168,323
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 237 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 124 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3957863 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 70,915,998 | 71,084,320 | ||
| nsv3957863 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_004070871.1 | Chr11|NW_0 04070871.1 | 460,211 | 578,533 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15213841 | deletion | Optical mapping | Optical mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15213841 | Submitted genomic | NC_000011.10:g.(70 915998_?)_(?_71084 320)del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 70,915,998 | 71,084,320 | ||
| nssv15213841 | Remapped | Pass | NW_004070871.1:g.( 460211_?)_(?_57853 3)del | GRCh37.p13 | First Pass | NW_004070871.1 | Chr11|NW_0 04070871.1 | 460,211 | 578,533 |