nsv3959687
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:insertion
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:92,239
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 612 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 612 SVs from 72 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3959687 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 20,560,192 | 20,652,430 | ||
| nsv3959687 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 20,886,685 | 20,978,923 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15220301 | insertion | Optical mapping | Optical mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15220301 | Submitted genomic | NC_000001.11:g.(20 560192_?)_(?_20652 430)ins14361 | GRCh38 (hg38) | NC_000001.11 | Chr1 | 20,560,192 | 20,652,430 | ||
| nssv15220301 | Remapped | Perfect | NC_000001.10:g.(20 886685_?)_(?_20978 923)ins14361 | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 20,886,685 | 20,978,923 |