nsv3962405
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:copy number variation
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:50,115
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 334 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 334 SVs from 67 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3962405 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 123,181,649 | 123,231,763 | ||
| nsv3962405 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 122,821,703 | 122,871,817 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15209593 | duplication | Optical mapping | Optical mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15209593 | Submitted genomic | NC_000007.14:g.(12 3181649_?)_(?_1232 31763)dup | GRCh38 (hg38) | NC_000007.14 | Chr7 | 123,181,649 | 123,231,763 | ||
| nssv15209593 | Remapped | Perfect | NC_000007.13:g.(12 2821703_?)_(?_1228 71817)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 122,821,703 | 122,871,817 |