nsv3971439
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:inversion
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,187,896
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 14548 SVs from 126 studies. See in: genome view
Overlapping variant regions from other studies: 14584 SVs from 126 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3971439 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 149,962,989 | 154,150,884 | ||
| nsv3971439 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 149,660,078 | 153,847,969 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15214806 | inversion | Optical mapping | Optical mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15214806 | Submitted genomic | NC_000007.14:g.(14 9962989_?)_(?_1541 50884)inv | GRCh38 (hg38) | NC_000007.14 | Chr7 | 149,962,989 | 154,150,884 | ||
| nssv15214806 | Remapped | Perfect | NC_000007.13:g.(14 9660078_?)_(?_1538 47969)inv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 149,660,078 | 153,847,969 |