nsv432414
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:Merging, SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:104,945
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 369 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 369 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 10 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv432414 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 36,094,469 | 36,199,413 |
| nsv432414 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 36,135,961 | 36,240,905 |
| nsv432414 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000003.9 | Chr3 | 36,110,965 | 36,215,909 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv565895 | copy number loss | 51504 | Merging, SNP array | Merging, SNP genotyping analysis | nssv563366, nssv561348, nssv565598 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv565895 | Remapped | Perfect | NC_000003.12:g.(?_ 36094469)_(3619941 3_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 36,094,469 | 36,199,413 |
| nssv565895 | Remapped | Perfect | NC_000003.11:g.(?_ 36135961)_(3624090 5_?)del | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 36,135,961 | 36,240,905 |
| nssv565895 | Submitted genomic | NC_000003.9:g.(?_3 6110965)_(36215909 _?)del | NCBI35 (hg17) | NC_000003.9 | Chr3 | 36,110,965 | 36,215,909 |