nsv436030
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:21,877
- Description:Unmated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 291 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 291 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436030 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 85,516,955 | 85,538,831 |
| nsv436030 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 85,982,638 | 86,004,514 |
| nsv436030 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_003871055.3 | Chr1|NW_00 3871055.3 | 2,339,313 | 2,362,370 |
| nsv436030 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 85,755,226 | 85,777,102 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466117 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 468 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466117 | Remapped | Perfect | NC_000001.11:g.(85 516955_?)_(?_85538 831)ins? | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 85,516,955 | 85,538,831 |
| nssv466117 | Remapped | Pass | NW_003871055.3:g.( 2339313_?)_(?_2362 370)ins? | GRCh37.p13 | Second Pass | NW_003871055.3 | Chr1|NW_00 3871055.3 | 2,339,313 | 2,362,370 |
| nssv466117 | Remapped | Perfect | NC_000001.10:g.(85 982638_?)_(?_86004 514)ins? | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 85,982,638 | 86,004,514 |
| nssv466117 | Submitted genomic | NC_000001.9:g.(857 55226_?)_(?_857771 02)ins(0_?) | NCBI36 (hg18) | NC_000001.9 | Chr1 | 85,755,226 | 85,777,102 |