nsv4579111
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:628,591
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1525 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 1528 SVs from 79 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4579111 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 114,376,708 | 115,005,298 |
| nsv4579111 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 114,919,330 | 115,547,919 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16097192 | deletion | Curated | Curated |
| nssv16111327 | deletion | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16097192 | Remapped | Perfect | NC_000001.11:g.(?_ 114376708)_(115005 298_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 114,376,708 | 115,005,298 |
| nssv16111327 | Remapped | Perfect | NC_000001.11:g.(?_ 114376708)_(115005 298_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 114,376,708 | 115,005,298 |
| nssv16097192 | Submitted genomic | NC_000001.10:g.(?_ 114919330)_(115547 919_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 114,919,330 | 115,547,919 | ||
| nssv16111327 | Submitted genomic | NC_000001.10:g.(?_ 114919330)_(115547 919_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 114,919,330 | 115,547,919 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16097192 | 0.025 | 1 | 40 |
| nssv16111327 | 0.002 | 1 | 450 |