nsv4593739
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,684
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1228 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 1228 SVs from 79 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4593739 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 103,611,184 | 103,620,867 |
| nsv4593739 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 104,153,806 | 104,163,489 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16092981 | duplication | Curated | Curated |
| nssv16107655 | deletion | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16092981 | Remapped | Perfect | NC_000001.11:g.(?_ 103611184)_(103620 867_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 103,611,184 | 103,620,867 |
| nssv16107655 | Remapped | Perfect | NC_000001.11:g.(?_ 103611184)_(103620 867_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 103,611,184 | 103,620,867 |
| nssv16092981 | Submitted genomic | NC_000001.10:g.(?_ 104153806)_(104163 489_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 104,153,806 | 104,163,489 | ||
| nssv16107655 | Submitted genomic | NC_000001.10:g.(?_ 104153806)_(104163 489_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 104,153,806 | 104,163,489 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16092981 | 0.011 | 9 | 845 |
| nssv16107655 | 0.018 | 15 | 845 |