nsv4603086
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:199,971
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 642 SVs from 68 studies. See in: genome view
Overlapping variant regions from other studies: 642 SVs from 68 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4603086 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 89,541,729 | 89,741,699 |
| nsv4603086 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 89,171,043 | 89,371,013 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16119221 | deletion | Curated | Curated |
| nssv16124919 | duplication | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16119221 | Remapped | Perfect | NC_000007.14:g.(?_ 89541729)_(8974169 9_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 89,541,729 | 89,741,699 |
| nssv16124919 | Remapped | Perfect | NC_000007.14:g.(?_ 89541729)_(8974169 9_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 89,541,729 | 89,741,699 |
| nssv16119221 | Submitted genomic | NC_000007.13:g.(?_ 89171043)_(8937101 3_?)del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 89,171,043 | 89,371,013 | ||
| nssv16124919 | Submitted genomic | NC_000007.13:g.(?_ 89171043)_(8937101 3_?)dup | GRCh37 (hg19) | NC_000007.13 | Chr7 | 89,171,043 | 89,371,013 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16119221 | 0.1 | 4 | 40 |
| nssv16124919 | 0.1 | 4 | 40 |