nsv4620128
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:39,422
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 246 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 246 SVs from 50 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4620128 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 37,265,930 | 37,305,351 |
| nsv4620128 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 37,756,832 | 37,796,253 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16144521 | deletion | Curated | Curated |
| nssv16146773 | duplication | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16144521 | Remapped | Perfect | NC_000019.10:g.(?_ 37265930)_(3730535 1_?)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 37,265,930 | 37,305,351 |
| nssv16146773 | Remapped | Perfect | NC_000019.10:g.(?_ 37265930)_(3730535 1_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 37,265,930 | 37,305,351 |
| nssv16144521 | Submitted genomic | NC_000019.9:g.(?_3 7756832)_(37796253 _?)del | GRCh37 (hg19) | NC_000019.9 | Chr19 | 37,756,832 | 37,796,253 | ||
| nssv16146773 | Submitted genomic | NC_000019.9:g.(?_3 7756832)_(37796253 _?)dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 37,756,832 | 37,796,253 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16144521 | 0.125 | 5 | 40 |
| nssv16146773 | 0.4 | 16 | 40 |