nsv4670274
- Organism: Homo sapiens
- Study:nstd186 (NCBI Curated Common Structural Variants)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,126
- Description:nsv4619534 from DECIPHER Consensus CNVs. For a full list of variants now included in nstd186, refer to the mapping file provided here.
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 136 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 136 SVs from 39 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4670274 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 11,927,971 | 11,950,096 |
| nsv4670274 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 12,021,828 | 12,043,953 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16186796 | deletion | Curated | Curated |
| nssv16198960 | duplication | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16186796 | Remapped | Perfect | NC_000016.10:g.(?_ 11927971)_(1195009 6_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 11,927,971 | 11,950,096 |
| nssv16198960 | Remapped | Perfect | NC_000016.10:g.(?_ 11927971)_(1195009 6_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 11,927,971 | 11,950,096 |
| nssv16186796 | Submitted genomic | NC_000016.9:g.(?_1 2021828)_(12043953 _?)del | GRCh37 (hg19) | NC_000016.9 | Chr16 | 12,021,828 | 12,043,953 | ||
| nssv16198960 | Submitted genomic | NC_000016.9:g.(?_1 2021828)_(12043953 _?)dup | GRCh37 (hg19) | NC_000016.9 | Chr16 | 12,021,828 | 12,043,953 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16186796 | 0.013 | 11 | 845 |
| nssv16198960 | 0.025 | 21 | 845 |