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dbVar

Database of genomic structural variation

nsv511027

Organism: Homo sapiens

Study:nstd49 (Teague et al. 2010)
Variant Type:inversion
Method Type:Optical mapping
Submitted on:NCBI35 (hg17)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:69,939

Publication(s):Teague et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 903 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):113,835,942-113,905,880

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv511027	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	113,835,942	113,905,880
nsv511027	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000013.10	Chr13	114,538,915	114,608,853
nsv511027	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000013.9	Chr13	113,505,090	113,575,028

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv621625	inversion	GM15510	Optical mapping	Optical mapping	1,740
nssv622401	inversion	GM10860	Optical mapping	Optical mapping	1,998
nssv624345	inversion	GM18994	Optical mapping	Optical mapping	1,936

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv621625	Remapped	Perfect	NC_000013.11:g.(11 3835942_?)_(?_1139 05880)inv	GRCh38.p12	First Pass	NC_000013.11	Chr13	113,835,942	113,905,880
nssv622401	Remapped	Perfect	NC_000013.11:g.(11 3835942_?)_(?_1139 05880)inv	GRCh38.p12	First Pass	NC_000013.11	Chr13	113,835,942	113,905,880
nssv624345	Remapped	Perfect	NC_000013.11:g.(11 3835942_?)_(?_1139 05880)inv	GRCh38.p12	First Pass	NC_000013.11	Chr13	113,835,942	113,905,880
nssv621625	Remapped	Perfect	NC_000013.10:g.(11 4538915_?)_(?_1146 08853)inv	GRCh37.p13	First Pass	NC_000013.10	Chr13	114,538,915	114,608,853
nssv622401	Remapped	Perfect	NC_000013.10:g.(11 4538915_?)_(?_1146 08853)inv	GRCh37.p13	First Pass	NC_000013.10	Chr13	114,538,915	114,608,853
nssv624345	Remapped	Perfect	NC_000013.10:g.(11 4538915_?)_(?_1146 08853)inv	GRCh37.p13	First Pass	NC_000013.10	Chr13	114,538,915	114,608,853
nssv621625	Submitted genomic		NC_000013.9:g.(113 505090_?)_(?_11357 5028)inv	NCBI35 (hg17)		NC_000013.9	Chr13	113,505,090	113,575,028
nssv622401	Submitted genomic		NC_000013.9:g.(113 505090_?)_(?_11357 5028)inv	NCBI35 (hg17)		NC_000013.9	Chr13	113,505,090	113,575,028
nssv624345	Submitted genomic		NC_000013.9:g.(113 505090_?)_(?_11357 5028)inv	NCBI35 (hg17)		NC_000013.9	Chr13	113,505,090	113,575,028

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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