nsv511064
- Organism: Homo sapiens
- Study:nstd49 (Teague et al. 2010)
- Variant Type:inversion
- Method Type:Optical mapping
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:150,479
- Publication(s):Teague et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 628 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 733 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 12 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv511064 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 25,852,971 | 26,003,449 |
| nsv511064 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000020.10 | Chr20 | 25,833,607 | 25,984,085 |
| nsv511064 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000020.9 | Chr20 | 25,781,607 | 25,932,085 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv622430 | inversion | GM10860 | Optical mapping | Optical mapping | 1,998 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv622430 | Remapped | Perfect | NC_000020.11:g.(25 852971_?)_(?_26003 449)inv | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 25,852,971 | 26,003,449 |
| nssv622430 | Remapped | Perfect | NC_000020.10:g.(25 833607_?)_(?_25984 085)inv | GRCh37.p13 | First Pass | NC_000020.10 | Chr20 | 25,833,607 | 25,984,085 |
| nssv622430 | Submitted genomic | NC_000020.9:g.(257 81607_?)_(?_259320 85)inv | NCBI35 (hg17) | NC_000020.9 | Chr20 | 25,781,607 | 25,932,085 |