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dbVar

Database of genomic structural variation

nsv6116526

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:nsv5425827 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 27 studies. See in: genome view

Remapped(Score: Perfect):72,347,196-72,347,196

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6116526	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	72,347,196	72,347,196
nsv6116526	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	72,639,537	72,639,537

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17964303	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17964303	Remapped	Perfect	NC_000015.10:g.723 47196_72347197ins?	GRCh38.p12	First Pass	NC_000015.10	Chr15	72,347,196	72,347,196
nssv17964303	Submitted genomic		NC_000015.9:g.7263 9537_72639538ins?	GRCh37 (hg19)		NC_000015.9	Chr15	72,639,537	72,639,537

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17964303	0.715	4436	6206

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