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dbVar

Database of genomic structural variation

nsv6502068

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:75,700

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 573 SVs from 75 studies. See in: genome view

Submitted genomic74,352,901-74,428,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6502068	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	74,352,901	74,428,600
nsv6502068	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	74,386,799	74,462,498

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18189022	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18189022	Submitted genomic		NC_000016.10:g.743 52901_74428600dup	GRCh38 (hg38)		NC_000016.10	Chr16	74,352,901	74,428,600
nssv18189022	Remapped	Perfect	NC_000016.9:g.7438 6799_74462498dup	GRCh37.p13	First Pass	NC_000016.9	Chr16	74,386,799	74,462,498

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18189022	0.561	20196	36012

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