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dbVar

Database of genomic structural variation

nsv6531234

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,215

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 148 SVs from 28 studies. See in: genome view

Submitted genomic17,229,406-17,233,620

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6531234	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	17,229,406	17,233,620
nsv6531234	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	17,340,215	17,344,429

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18197688	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18197688	Submitted genomic		NC_000019.10:g.172 29406_17233620dup	GRCh38 (hg38)		NC_000019.10	Chr19	17,229,406	17,233,620
nssv18197688	Remapped	Perfect	NC_000019.9:g.1734 0215_17344429dup	GRCh37.p13	First Pass	NC_000019.9	Chr19	17,340,215	17,344,429

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18197688	<0.001	5	39252

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