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dbVar

Database of genomic structural variation

nsv6621018

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:205,678

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 783 SVs from 89 studies. See in: genome view

Remapped(Score: Perfect):67,758,808-67,964,485

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6621018	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	67,758,808	67,964,485
nsv6621018	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	67,526,279	67,731,956

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282766	duplication	OSC2189	SNP array	Probe signal intensity	6
nssv18284446	duplication	OSC2556	SNP array	Probe signal intensity	nssv18284447, nssv18284815, nssv18284448
nssv18291258	duplication	OSC3639	SNP array	Probe signal intensity	nssv18291257, nssv18291256, nssv18291255
nssv18324241	duplication	OSC1615	SNP array	Probe signal intensity	nssv18324522, nssv18324521, nssv18324242

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282766	Remapped	Perfect	NC_000011.10:g.(?_ 67758808)_(6796448 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	67,758,808	67,964,485
nssv18284446	Remapped	Perfect	NC_000011.10:g.(?_ 67758808)_(6796448 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	67,758,808	67,964,485
nssv18291258	Remapped	Perfect	NC_000011.10:g.(?_ 67758808)_(6796448 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	67,758,808	67,964,485
nssv18324241	Remapped	Perfect	NC_000011.10:g.(?_ 67758808)_(6796448 5_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	67,758,808	67,964,485
nssv18282766	Submitted genomic		NC_000011.9:g.(?_6 7526279)_(67731956 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	67,526,279	67,731,956
nssv18284446	Submitted genomic		NC_000011.9:g.(?_6 7526279)_(67731956 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	67,526,279	67,731,956
nssv18291258	Submitted genomic		NC_000011.9:g.(?_6 7526279)_(67731956 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	67,526,279	67,731,956
nssv18324241	Submitted genomic		NC_000011.9:g.(?_6 7526279)_(67731956 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	67,526,279	67,731,956

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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