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dbVar

Database of genomic structural variation

nsv6623297

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:20,123

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 276 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):93,600,349-93,620,471

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623297	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nsv6623297	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	94,143,578	94,163,700

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284162	deletion	OSC2525	SNP array	Probe signal intensity	12
nssv18289022	deletion	OSC3321	SNP array	Probe signal intensity	5
nssv18289250	deletion	OSC3502	SNP array	Probe signal intensity	6
nssv18289370	deletion	OSC3410	SNP array	Probe signal intensity	7
nssv18291257	deletion	OSC3639	SNP array	Probe signal intensity	nssv18291255, nssv18291256, nssv18291258

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284162	Remapped	Perfect	NC_000015.10:g.(?_ 93600349)_(9362047 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nssv18289022	Remapped	Perfect	NC_000015.10:g.(?_ 93600349)_(9362047 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nssv18289250	Remapped	Perfect	NC_000015.10:g.(?_ 93600349)_(9362047 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nssv18289370	Remapped	Perfect	NC_000015.10:g.(?_ 93600349)_(9362047 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nssv18291257	Remapped	Perfect	NC_000015.10:g.(?_ 93600349)_(9362047 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	93,600,349	93,620,471
nssv18284162	Submitted genomic		NC_000015.9:g.(?_9 4143578)_(94163700 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,143,578	94,163,700
nssv18289022	Submitted genomic		NC_000015.9:g.(?_9 4143578)_(94163700 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,143,578	94,163,700
nssv18289250	Submitted genomic		NC_000015.9:g.(?_9 4143578)_(94163700 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,143,578	94,163,700
nssv18289370	Submitted genomic		NC_000015.9:g.(?_9 4143578)_(94163700 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,143,578	94,163,700
nssv18291257	Submitted genomic		NC_000015.9:g.(?_9 4143578)_(94163700 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	94,143,578	94,163,700

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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