nsv6622984

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:38
Validation:Not tested
Clinical Assertions: No
Region Size:115,067

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1610 SVs from 89 studies. See in: genome view

Remapped(Score: Perfect):24,112,065-24,227,131

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6622984	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nsv6622984	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	24,357,212	24,472,278

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282365	deletion	OSC0219	SNP array	Probe signal intensity	6
nssv18283179	duplication	OSC2285	SNP array	Probe signal intensity	nssv18283516, nssv18283517
nssv18283478	deletion	OSC2260	SNP array	Probe signal intensity	nssv18281906
nssv18283549	deletion	OSC2304	SNP array	Probe signal intensity	9
nssv18284454	deletion	OSC2561	SNP array	Probe signal intensity	11
nssv18284886	deletion	OSC2607	SNP array	Probe signal intensity	8
nssv18288583	deletion	OSC3269	SNP array	Probe signal intensity	nssv18288888
nssv18288809	deletion	OSC3204	SNP array	Probe signal intensity	7
nssv18288970	deletion	OSC3329	SNP array	Probe signal intensity	5
nssv18289080	deletion	OSC3374	SNP array	Probe signal intensity	6
nssv18290201	deletion	OSC3552	SNP array	Probe signal intensity	6
nssv18290605	deletion	OSC3628	SNP array	Probe signal intensity	6
nssv18290679	deletion	OSC0034	SNP array	Probe signal intensity	9
nssv18290855	deletion	OSC3823	SNP array	Probe signal intensity	12
nssv18292319	deletion	OSC3951	SNP array	Probe signal intensity	6
nssv18292704	deletion	OSC0410	SNP array	Probe signal intensity	7
nssv18293979	deletion	OSC4226	SNP array	Probe signal intensity	8
nssv18294098	deletion	OSC4310	SNP array	Probe signal intensity	6
nssv18294688	deletion	OSC4326	SNP array	Probe signal intensity	7
nssv18294703	deletion	OSC4339	SNP array	Probe signal intensity	6
nssv18294853	deletion	OSC4466	SNP array	Probe signal intensity	nssv18295227, nssv18294854
nssv18294905	duplication	OSC4244	SNP array	Probe signal intensity	5
nssv18294921	deletion	OSC4257	SNP array	Probe signal intensity	12
nssv18295734	deletion	OSC4671	SNP array	Probe signal intensity	8
nssv18297996	duplication	OSC0510	SNP array	Probe signal intensity	8
nssv18298620	deletion	OSC0509	SNP array	Probe signal intensity	nssv18297727, nssv18298615
nssv18300027	deletion	OSC0545	SNP array	Probe signal intensity	nssv18299145, nssv18300021, nssv18300026
nssv18300064	deletion	OSC0546	SNP array	Probe signal intensity	9
nssv18309961	deletion	OSC0749	SNP array	Probe signal intensity	6
nssv18320277	duplication	OSC0951	SNP array	Probe signal intensity	6
nssv18320355	deletion	OSC0997	SNP array	Probe signal intensity	5
nssv18320360	deletion	OSC1002	SNP array	Probe signal intensity	6
nssv18322130	deletion	OSC1239	SNP array	Probe signal intensity	9
nssv18322272	deletion	OSC1338	SNP array	Probe signal intensity	7
nssv18323620	deletion	OSC1637	SNP array	Probe signal intensity	nssv18323619, nssv18323990, nssv18324268
nssv18324667	deletion	OSC1706	SNP array	Probe signal intensity	6
nssv18324867	duplication	OSC1857	SNP array	Probe signal intensity	7
nssv18325663	duplication	OSC1952	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282365	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18283179	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18283478	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18283549	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18284454	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18284886	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18288583	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18288809	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18288970	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18289080	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18290201	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18290605	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18290679	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18290855	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18292319	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18292704	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18293979	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294098	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294688	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294703	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294853	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294905	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18294921	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18295734	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18297996	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18298620	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18300027	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18300064	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18309961	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18320277	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18320355	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18320360	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18322130	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18322272	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18323620	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18324667	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18324867	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18325663	Remapped	Perfect	NC_000015.10:g.(?_ 24112065)_(2422713 1_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,112,065	24,227,131
nssv18282365	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18283179	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18283478	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18283549	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18284454	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18284886	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18288583	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18288809	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18288970	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18289080	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18290201	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18290605	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18290679	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18290855	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18292319	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18292704	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18293979	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294098	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294688	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294703	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294853	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294905	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18294921	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18295734	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18297996	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18298620	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18300027	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18300064	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18309961	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18320277	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18320355	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18320360	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18322130	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18322272	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18323620	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18324667	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18324867	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278
nssv18325663	Submitted genomic		NC_000015.9:g.(?_2 4357212)_(24472278 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,357,212	24,472,278

dbVar

Database of genomic structural variation

nsv6622984

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant