nsv6623943

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:17
Validation:Not tested
Clinical Assertions: No
Region Size:18,525

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 325 SVs from 62 studies. See in: genome view

Remapped(Score: Perfect):72,055,841-72,074,365

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623943	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nsv6623943	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	72,089,740	72,108,264

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18296899	deletion	OSC4840	SNP array	Probe signal intensity	nssv18296898
nssv18298210	deletion	OSC5131	SNP array	Probe signal intensity	5
nssv18298249	deletion	OSC5166	SNP array	Probe signal intensity	12
nssv18298610	deletion	OSC4944	SNP array	Probe signal intensity	11
nssv18299329	deletion	OSC5272	SNP array	Probe signal intensity	14
nssv18299613	deletion	OSC5224	SNP array	Probe signal intensity	nssv18299030, nssv18299614, nssv18299615
nssv18299880	deletion	OSC5201	SNP array	Probe signal intensity	nssv18299002, nssv18299574, nssv18299879
nssv18300135	deletion	OSC5376	SNP array	Probe signal intensity	6
nssv18300276	deletion	OSC5484	SNP array	Probe signal intensity	7
nssv18300386	deletion	OSC5571	SNP array	Probe signal intensity	8
nssv18300627	deletion	OSC5570	SNP array	Probe signal intensity	7
nssv18300687	deletion	OSC5609	SNP array	Probe signal intensity	14
nssv18300701	deletion	OSC5619	SNP array	Probe signal intensity	5
nssv18300709	deletion	OSC5623	SNP array	Probe signal intensity	nssv18300707, nssv18300708, nssv18301984
nssv18300826	deletion	OSC5454	SNP array	Probe signal intensity	7
nssv18301223	deletion	OSC5529	SNP array	Probe signal intensity	nssv18300325, nssv18300930
nssv18302059	deletion	OSC5672	SNP array	Probe signal intensity	nssv18301447, nssv18301694, nssv18301693

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18296899	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18298210	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18298249	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18298610	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18299329	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18299613	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18299880	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300135	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300276	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300386	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300627	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300687	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300701	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300709	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18300826	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18301223	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18302059	Remapped	Perfect	NC_000016.10:g.(?_ 72055841)_(7207436 5_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	72,055,841	72,074,365
nssv18296899	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18298210	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18298249	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18298610	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18299329	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18299613	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18299880	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300135	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300276	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300386	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300627	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300687	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300701	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300709	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18300826	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18301223	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264
nssv18302059	Submitted genomic		NC_000016.9:g.(?_7 2089740)_(72108264 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	72,089,740	72,108,264

dbVar

Database of genomic structural variation

nsv6623943

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant