nsv6625880
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:24,118
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 824 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 824 SVs from 82 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625880 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 16,922,675 | 16,946,792 |
| nsv6625880 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 17,249,170 | 17,273,287 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18285516 | duplication | OSC2820 | SNP array | Probe signal intensity | nssv18285518, nssv18286431, nssv18286432 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18285516 | Remapped | Perfect | NC_000001.11:g.(?_ 16922675)_(1694679 2_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 16,922,675 | 16,946,792 |
| nssv18285516 | Submitted genomic | NC_000001.10:g.(?_ 17249170)_(1727328 7_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 17,249,170 | 17,273,287 |