nsv822824
- Organism: Homo sapiens
- Study:nstd67 (Park et al. 2010)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:183,190
- Publication(s):Park et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 961 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 961 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 358 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv822824 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 167,887,816 | 168,071,005 |
| nsv822824 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 168,808,967 | 168,992,156 |
| nsv822824 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 169,045,542 | 169,228,731 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1432023 | copy number loss | AK20 | Oligo aCGH | Probe signal intensity | 768 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1432023 | Remapped | Perfect | NC_000004.12:g.(?_ 167887816)_(168071 005_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 167,887,816 | 168,071,005 |
| nssv1432023 | Remapped | Perfect | NC_000004.11:g.(?_ 168808967)_(168992 156_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 168,808,967 | 168,992,156 |
| nssv1432023 | Submitted genomic | NC_000004.10:g.(?_ 169045542)_(169228 731_?)del | NCBI36 (hg18) | NC_000004.10 | Chr4 | 169,045,542 | 169,228,731 |