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dbVar

Database of genomic structural variation

nsv823758

Organism: Homo sapiens

Study:nstd67 (Park et al. 2010)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:13,250

Publication(s):Park et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 171 SVs from 44 studies. See in: genome view

Remapped(Score: Perfect):79,847,370-79,860,619

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv823758	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	79,847,370	79,860,619
nsv823758	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	80,557,087	80,570,336
nsv823758	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000006.10	Chr6	80,613,806	80,627,055

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1426719	copy number loss	AK6	Oligo aCGH	Probe signal intensity	714
nssv1433252	copy number loss	NA18592	Oligo aCGH	Probe signal intensity	636

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1426719	Remapped	Perfect	NC_000006.12:g.(?_ 79847370)_(7986061 9_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	79,847,370	79,860,619
nssv1433252	Remapped	Perfect	NC_000006.12:g.(?_ 79847370)_(7986061 9_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	79,847,370	79,860,619
nssv1426719	Remapped	Perfect	NC_000006.11:g.(?_ 80557087)_(8057033 6_?)del	GRCh37.p13	First Pass	NC_000006.11	Chr6	80,557,087	80,570,336
nssv1433252	Remapped	Perfect	NC_000006.11:g.(?_ 80557087)_(8057033 6_?)del	GRCh37.p13	First Pass	NC_000006.11	Chr6	80,557,087	80,570,336
nssv1426719	Submitted genomic		NC_000006.10:g.(?_ 80613806)_(8062705 5_?)del	NCBI36 (hg18)		NC_000006.10	Chr6	80,613,806	80,627,055
nssv1433252	Submitted genomic		NC_000006.10:g.(?_ 80613806)_(8062705 5_?)del	NCBI36 (hg18)		NC_000006.10	Chr6	80,613,806	80,627,055

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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