nsv824210
- Organism: Homo sapiens
- Study:nstd67 (Park et al. 2010)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:7
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,334
- Publication(s):Park et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 286 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 286 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 128 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv824210 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nsv824210 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nsv824210 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1425067 | copy number loss | AK2 | Oligo aCGH | Probe signal intensity | 614 |
| nssv1427570 | copy number loss | AK8 | Oligo aCGH | Probe signal intensity | 623 |
| nssv1428387 | copy number loss | AK10 | Oligo aCGH | Probe signal intensity | 649 |
| nssv1429906 | copy number loss | AK14 | Oligo aCGH | Probe signal intensity | 630 |
| nssv1431405 | copy number loss | AK18 | Oligo aCGH | Probe signal intensity | 628 |
| nssv1433652 | copy number loss | NA18592 | Oligo aCGH | Probe signal intensity | 636 |
| nssv1440437 | copy number loss | NA18564 | Oligo aCGH | Probe signal intensity | 612 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1425067 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1427570 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1428387 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1429906 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1431405 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1433652 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1440437 | Remapped | Perfect | NC_000007.14:g.(?_ 91403462)_(9141179 5_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 91,403,462 | 91,411,795 |
| nssv1425067 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1427570 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1428387 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1429906 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1431405 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1433652 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1440437 | Remapped | Perfect | NC_000007.13:g.(?_ 91032777)_(9104111 0_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 91,032,777 | 91,041,110 |
| nssv1425067 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1427570 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1428387 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1429906 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1431405 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1433652 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 | ||
| nssv1440437 | Submitted genomic | NC_000007.12:g.(?_ 90870713)_(9087904 6_?)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 90,870,713 | 90,879,046 |