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dbVar

Database of genomic structural variation

nsv826938

Organism: Homo sapiens

Study:nstd67 (Park et al. 2010)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:27,055

Publication(s):Park et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 372 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):44,032,361-44,059,415

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv826938	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	44,032,361	44,059,415
nsv826938	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	44,501,564	44,528,618
nsv826938	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000014.7	Chr14	43,571,314	43,598,368

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1427824	copy number loss	AK8	Oligo aCGH	Probe signal intensity	623
nssv1435863	copy number loss	NA18592	Oligo aCGH	Probe signal intensity	636

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1427824	Remapped	Perfect	NC_000014.9:g.(?_4 4032361)_(44059415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	44,032,361	44,059,415
nssv1435863	Remapped	Perfect	NC_000014.9:g.(?_4 4032361)_(44059415 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	44,032,361	44,059,415
nssv1427824	Remapped	Perfect	NC_000014.8:g.(?_4 4501564)_(44528618 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	44,501,564	44,528,618
nssv1435863	Remapped	Perfect	NC_000014.8:g.(?_4 4501564)_(44528618 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	44,501,564	44,528,618
nssv1427824	Submitted genomic		NC_000014.7:g.(?_4 3571314)_(43598368 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	43,571,314	43,598,368
nssv1435863	Submitted genomic		NC_000014.7:g.(?_4 3571314)_(43598368 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	43,571,314	43,598,368

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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