nsv869911
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:25,935
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 290 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 290 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv869911 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 14,812,324 | 14,814,731 | 14,835,328 | 14,838,258 |
| nsv869911 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000021.8 | Chr21 | 16,184,645 | 16,187,052 | 16,207,649 | 16,210,579 |
| nsv869911 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000021.7 | Chr21 | 15,106,516 | 15,108,923 | 15,129,520 | 15,132,450 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1496122 | copy number loss | OAT_71 | Oligo aCGH | Probe signal intensity | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1496122 | Remapped | Perfect | NC_000021.9:g.(148 12324_14814731)_(1 4835328_14838258)d el | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 14,812,324 | 14,814,731 | 14,835,328 | 14,838,258 |
| nssv1496122 | Remapped | Perfect | NC_000021.8:g.(161 84645_16187052)_(1 6207649_16210579)d el | GRCh37.p13 | First Pass | NC_000021.8 | Chr21 | 16,184,645 | 16,187,052 | 16,207,649 | 16,210,579 |
| nssv1496122 | Submitted genomic | NC_000021.7:g.(151 06516_15108923)_(1 5129520_15132450)d el | NCBI36 (hg18) | NC_000021.7 | Chr21 | 15,106,516 | 15,108,923 | 15,129,520 | 15,132,450 |