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dbVar

Database of genomic structural variation

nsv870425

Organism: Homo sapiens

Study:nstd53 (Tuttelmann et al. 2011)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:145,240

Publication(s):Tüttelmann et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1116 SVs from 99 studies. See in: genome view

Remapped(Score: Perfect):70,101,741-70,246,980

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv870425	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	70,101,741	70,114,836	70,203,726	70,246,980
nsv870425	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	70,135,644	70,148,739	70,237,629	70,280,883
nsv870425	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000016.8	Chr16	68,693,145	68,706,240	68,795,130	68,838,384

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1497400	copy number gain	CONTROL_13	Oligo aCGH	Probe signal intensity	8
nssv1497154	copy number gain	CONTROL_44	Oligo aCGH	Probe signal intensity	13
nssv1498592	copy number gain	OAT_79	Oligo aCGH	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1497400	Remapped	Perfect	NC_000016.10:g.(70 063170_70075602)_( 70203726_70246980) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	70,063,170	70,075,602	70,203,726	70,246,980
nssv1497154	Remapped	Perfect	NC_000016.10:g.(70 081297_70087973)_( 70203726_70246980) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	70,081,297	70,087,973	70,203,726	70,246,980
nssv1498592	Remapped	Perfect	NC_000016.10:g.(70 101741_70114836)_( 70203726_70246980) dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	70,101,741	70,114,836	70,203,726	70,246,980
nssv1497400	Remapped	Perfect	NC_000016.9:g.(700 97073_70109505)_(7 0237629_70280883)d up	GRCh37.p13	First Pass	NC_000016.9	Chr16	70,097,073	70,109,505	70,237,629	70,280,883
nssv1497154	Remapped	Perfect	NC_000016.9:g.(701 15200_70121876)_(7 0237629_70280883)d up	GRCh37.p13	First Pass	NC_000016.9	Chr16	70,115,200	70,121,876	70,237,629	70,280,883
nssv1498592	Remapped	Perfect	NC_000016.9:g.(701 35644_70148739)_(7 0237629_70280883)d up	GRCh37.p13	First Pass	NC_000016.9	Chr16	70,135,644	70,148,739	70,237,629	70,280,883
nssv1497400	Submitted genomic		NC_000016.8:g.(686 54574_68667006)_(6 8795130_68838384)d up	NCBI36 (hg18)		NC_000016.8	Chr16	68,654,574	68,667,006	68,795,130	68,838,384
nssv1497154	Submitted genomic		NC_000016.8:g.(686 72701_68679377)_(6 8795130_68838384)d up	NCBI36 (hg18)		NC_000016.8	Chr16	68,672,701	68,679,377	68,795,130	68,838,384
nssv1498592	Submitted genomic		NC_000016.8:g.(686 93145_68706240)_(6 8795130_68838384)d up	NCBI36 (hg18)		NC_000016.8	Chr16	68,693,145	68,706,240	68,795,130	68,838,384

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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