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nsv890775

  • Variant Calls:26
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:100,257

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 1781 SVs from 90 studies. See in: genome view    
Remapped(Score: Perfect):39,380,149-39,480,405Question Mark
Overlapping variant regions from other studies: 1781 SVs from 90 studies. See in: genome view    
Remapped(Score: Perfect):39,237,668-39,337,924Question Mark
Overlapping variant regions from other studies: 1055 SVs from 33 studies. See in: genome view    
Submitted genomic39,356,825-39,457,081Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv890775RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nsv890775RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nsv890775Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000008.9Chr839,356,82539,370,18739,450,16739,457,081

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1528974copy number lossSP81409SNP arraySNP genotyping analysis7
nssv1531801copy number lossMS10665SNP arraySNP genotyping analysis9
nssv1538290copy number lossMS13605SNP arraySNP genotyping analysis11
nssv1541013copy number lossMS15165SNP arraySNP genotyping analysis6
nssv1543012copy number lossMS16016SNP arraySNP genotyping analysis5
nssv1549086copy number lossMS18053SNP arraySNP genotyping analysis12
nssv1556086copy number lossMS21789SNP arraySNP genotyping analysis10
nssv1560144copy number gainMS24339SNP arraySNP genotyping analysis9
nssv1568394copy number lossIS31282SNP arraySNP genotyping analysis21
nssv1574180copy number lossIS33526SNP arraySNP genotyping analysisnssv1574179, nssv1574182, nssv1574181
nssv1577212copy number lossIS34387SNP arraySNP genotyping analysis9
nssv1580646copy number lossIS35411SNP arraySNP genotyping analysis13
nssv1582571copy number lossIS36011SNP arraySNP genotyping analysis14
nssv1582873copy number gainIS36195SNP arraySNP genotyping analysis12
nssv1582884copy number lossIS36196SNP arraySNP genotyping analysis20
nssv1583860copy number lossIS36689SNP arraySNP genotyping analysis13
nssv1584686copy number lossIS37144SNP arraySNP genotyping analysis9
nssv1587903copy number lossIS38131SNP arraySNP genotyping analysis6
nssv1588776copy number lossIS38242SNP arraySNP genotyping analysis12
nssv1589045copy number lossIS38291SNP arraySNP genotyping analysis10
nssv1589148copy number lossIS38294SNP arraySNP genotyping analysis10
nssv1591096copy number lossIS38635SNP arraySNP genotyping analysis11
nssv1594258copy number lossIS39745SNP arraySNP genotyping analysis13
nssv1595505copy number gainIS40240SNP arraySNP genotyping analysis11
nssv1600430copy number lossIS41883SNP arraySNP genotyping analysis11
nssv1600607copy number lossIS41904SNP arraySNP genotyping analysisnssv1600605, nssv1600606, nssv1600608

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1528974RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1531801RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1538290RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1541013RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1543012RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1549086RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1556086RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1560144RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
dup
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1568394RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1574180RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1577212RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1580646RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1582571RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1582873RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
dup
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1582884RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1583860RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1584686RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1587903RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1588776RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1589045RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1589148RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1591096RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1594258RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1595505RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
dup
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1600430RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1600607RemappedPerfectNC_000008.11:g.(39
380149_39393511)_(
39473491_39480405)
del
GRCh38.p12First PassNC_000008.11Chr839,380,14939,393,51139,473,49139,480,405
nssv1528974RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1531801RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1538290RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1541013RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1543012RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1549086RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1556086RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1560144RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
dup
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1568394RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1574180RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1577212RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1580646RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1582571RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1582873RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
dup
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1582884RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1583860RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1584686RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1587903RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1588776RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1589045RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1589148RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1591096RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1594258RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1595505RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
dup
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1600430RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1600607RemappedPerfectNC_000008.10:g.(39
237668_39251030)_(
39331010_39337924)
del
GRCh37.p13First PassNC_000008.10Chr839,237,66839,251,03039,331,01039,337,924
nssv1528974Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1531801Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1538290Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1541013Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1543012Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1549086Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1556086Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1560144Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
up
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1568394Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1574180Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1577212Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1580646Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1582571Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1582873Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
up
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1582884Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1583860Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1584686Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1587903Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1588776Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1589045Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1589148Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1591096Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1594258Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1595505Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
up
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1600430Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081
nssv1600607Submitted genomicNC_000008.9:g.(393
56825_39370187)_(3
9450167_39457081)d
el
NCBI36 (hg18)NC_000008.9Chr839,356,82539,370,18739,450,16739,457,081

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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